Skip to Content
Merck
  • QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

European journal of medicinal chemistry (2007-07-17)
A A Toropov, A P Toropova, I Raska
ABSTRACT

Simplified molecular input line entry system (SMILES) has been utilized in constructing quantitative structure-property relationships (QSPR) for octanol/water partition coefficient of vitamins and organic compounds of different classes by optimal descriptors. Statistical characteristics of the best model (vitamins) are the following: n=17, R(2)=0.9841, s=0.634, F=931 (training set); n=7, R(2)=0.9928, s=0.773, F=690 (test set). Using this approach for modeling octanol/water partition coefficient for a set of organic compounds gives a model that is statistically characterized by n=69, R(2)=0.9872, s=0.156, F=5184 (training set) and n=70, R(2)=0.9841, s=0.179, F=4195 (test set).

MATERIALS
Product Number
Brand
Product Description

Benzo[k]fluoranthene, BCR®, certified reference material
Supelco
Octane, analytical standard
Pyrene, BCR®, certified reference material
Sigma-Aldrich
Bromobenzene, ≥99.5% (GC)
Supelco
2-Methylbutane, analytical standard
Sigma-Aldrich
1-Chlorobutane, biotech. grade, for protein sequence analysis, ≥99.8%
Supelco
Naphthalene, analytical standard
Sigma-Aldrich
1,2,3-Trimethylbenzene
Sigma-Aldrich
4-Aminobenzoic acid, ReagentPlus®, 99%
Sigma-Aldrich
Propylbenzene, 98%
Sigma-Aldrich
Iodobenzene, 98%
Sigma-Aldrich
Hexamethylbenzene, 99%
Sigma-Aldrich
p-Cymene, ≥97%, FG
Sigma-Aldrich
1-Chloropropane, 98%
Sigma-Aldrich
Undecane, ≥99%
Sigma-Aldrich
Bromobenzene, ReagentPlus®, 99%
Sigma-Aldrich
Nonane, anhydrous, ≥99%
Sigma-Aldrich
1,2-Dibromobenzene, 98%
Supelco
Nonane, analytical standard
Sigma-Aldrich
L-Ascorbic acid, BioUltra, ≥99.5% (RT)
Supelco
Cyclohexane, analytical standard
Supelco
Undecane, analytical standard
Sigma-Aldrich
L-Ascorbic acid, puriss. p.a., ≥99.0% (RT)
Sigma-Aldrich
Trichloroethylene, anhydrous, contains 40 ppm diisopropylamine as stabilizer, ≥99%
Sigma-Aldrich
Benzo[k]fluoranthene, for fluorescence, ≥99%
Sigma-Aldrich
L-Ascorbic acid, 99%
Supelco
Chlorobenzene, analytical standard
Sigma-Aldrich
Pyrene, puriss. p.a., for fluorescence, ≥99.0% (GC)
Supelco
Butylbenzene, analytical standard
Sigma-Aldrich
Vitamin D2 solution, 100 μg/mL in ethanol, 98% (CP)